Journal articles

• Versatile high-resolution oligosaccharide microarrays for plant glycobiology and cell wall research
  Henriette L. Pedersen, Jonatan U. Fangel, Barry McCleary, Christian Ruzanski, Marie-Christine Ralet, Vladimir Farkas, Laura von Schantz, Susan E. Marcus, Mathias C. F. Andersen, Rob Field, Mats Ohlin, J. Paul Knox, Mads H. Clausen, William G.T.Willats, J. Biol. Chem. in press.
• GF-15, a novel inhibitor of centrosomal clustering, suppresses tumor cell growth in vitro and in vivo
  Marc S. Raab, Iris Breitkreutz, Simon Anderhub, Mads H. Rønnest, Blanka Leber, Thomas O. Larsen, Ludmila Weiz, Gleb Konotop, Patrick J. Hayden, Klaus Podar, Johannes Fruehauf, Felix Nissen, Walter Mier, Uwe Haberkorn, Anthony D. Ho, Hartmut Goldschmidt, Kenneth C. Anderson, Mads H. Clausen, Alwin Krämer, Cancer Res. 2012, 72, 5374-5385.
• Synthesis and Stability Studies of alpha, alpha-Difluoroester Phospholipids
  Palle J. Pedersen, Thomas L. Andresen, Mads H. Clausen, Eur. J. Org. Chem. accepted.
• The identification of cutin synthase: formation of the plant polyester cutin
  Trevor H. Yeats, Laetitia B. B. Martin, Hélène M.-F. Viart, Tal Isaacson, Yonghua He, Lingxia Zhao, Antonio J. Matas, Gregory J. Buda, David S. Domozych, Mads H. Clausen, Jocelyn K. C. Rose, Nature Chem. Biol. 2012, 8, 609-611.
• Synthesis of tocopheryl succinate phospholipid conjugates and monitoring of phospholipase A2 activity Palle J. Pedersen, Hélène M.-F. Viart, Fredrik Melander, Thomas L. Andresen, Robert Madsen, Mads H. Clausen, Bioorg. Med. Chem. 2012, 20, 3972-3978.
• Disparate SAR Data of Griseofulvin Analogs for the Dermatophytes Trichophyton mentagrophytes, T. rubrum and MDA-MB-231 Cancer Cells
  Mads H. Rønnest, Marc S. Raab, Simon Anderhub, Sven Boesen, Alwin Krämer, Thomas O. Larsen and Mads H. Clausen, J. Med. Chem.  2012, 55, 652-660. 
• Biologically Active Macrocyclic Compounds – from Natural Products to Diversity-Oriented Synthesis
  Charlotte M. Madsen and Mads H. Clausen, Eur. J. Org. Chem.  2011, 3107-3115. 
• (+)-Geodin from Aspergillus terreus
  Mads H. Rønnest, Morten T. Nielsen, Blanka Leber, Uffe H. Mortensen, Alwin Krämer, Mads H. Clausen,Thomas O. Larsen and Pernille Harris, Acta Crystallogr., Sect. C: Cryst. Struct. Commun. 2011, C67, o125-o128. 
• Selective acylation enhances membrane charge sensitivity of the antimicrobial peptide mastoparan-X
  Thomas Etzerodt, Jonas R. Henriksen, Palle Rasmussen, Mads H. Clausen, Thomas L. Andresen, Biophys. J. 2011, 100, 399-409. 
• Synthesis of new diverse macrocycles from diol precursors
  Charlotte M. Madsen, Martin Hansen, Marie V. Thrane and Mads H. Clausen, Tetrahedron 2010, 66, 9849-9859. 
• Synthesis and single crystal X-ray analysis of two griseofulvin metabolites
  Mads H. Rønnest, Pernille Harris, Charlotte H. Gotfredsen, Thomas O. Larsen and Mads H. Clausen, Tetrahedron Lett. 2010, 51, 5881-5882. 
• Prostaglandin phospholipid conjugates with unusual biophysical and cytotoxic properties
  Palle J. Pedersen, Sidsel K. Adolph, Thomas L. Andresen, Mogens W. Madsen, Robert Madsen and Mads H. Clausen, Bioorg. Med. Chem. Lett. 2010, 20, 4456-4458. 
• Liposomal Formulation of Retinoids Designed for Enzyme Triggered Release
  Palle J. Pedersen, Sidsel K. Adolph, Arun K. Subramanian, Ahmad Arouri, Thomas L. Andresen, Ole G. Mouritsen, Robert Madsen, Mogens W. Madsen, Günther H. Peters and Mads H. Clausen, J. Med. Chem. 2010, 53, 3782-3792.
• Isomerization of all-(E)-Retinoic Acid Mediated by Carbodiimide Activation - Synthesis of ATRA Ether Lipid Conjugates
  Mikkel S. Christensen, Palle J. Pedersen, Thomas L. Andresen, Robert Madsen and Mads H. Clausen, Eur. J. Org. Chem. 2010, 719-724.
• Structural insights into substrate specificity and the anti beta-elimination mechanism of pectate lyase
  Arefeh Seyedarabi, Teng Teng To, Salyha Ali, Syeed Hussain, Markus Fries, Robert Madsen, Mads H. Clausen, Susana Teixeira, Keith Brocklehurst and Richard Pickersgill, Biochemistry, 2010, 49, 539-546.
• Synthesis and Structure-Activity Relationship of Griseofulvin Analogues as Inhibitors of Centrosomal Clustering
  Mads H. Rønnest, Blanka Rebacz, Lene Markworth, Anette Terp, Thomas O. Larsen, Alwin Krämer and Mads H. Clausen, J. Med. Chem. 2009, 52, 3342–3347.
• Synthesis and Biophysical Characterization of Chlorambucil Anticancer Ether Lipid Prodrugs Palle J. Pedersen, Mikkel S. Christensen, Tristan Ruysschaert, Lars Linderoth, Thomas L. Andresen, Fredrik Melander, Ole G. Mouritsen, Robert Madsen and Mads H. Clausen, J. Med. Chem. 2009, 52, 3408–3415.
• Rapid synthesis of macrocycles from diol precursors
  Magnus J. Wingstrand, Charlotte M. Madsen and Mads H. Clausen, Tetrahedron Lett. 2009, 50, 693-695.
• Regio- and stereoselective hydrosilylation of immobilized terminal alkynes
  Palle J. Pedersen, Jonas Henriksen, Charlotte H. Gotfredsen and Mads H. Clausen, Tetrahedron Lett. 2008, 49, 6220-6223.
• Structural characterization of homogalacturonan by NMR spectroscopy - assignment of reference compounds
  Bent O. Petersen, Sebastian Meier, Jens Ø. Duus and Mads H. Clausen, Carbohydr. Res. 2008, 343, 2830-2833.
• Study of the Mode of Action of a Polygalacturonase from the Phytopathogen Burkholderia cepacia
  Claudia Massa, Mads H. Clausen, Jure Stojan, Doriano Lamba and Christiana Campa, Biochem. J. 2007, 407, 207-217.
• Identification of Griseofulvin as an Inhibitor of Centrosomal Clustering in a Phenotype-Based Screen
  Blanka Rebacz, Thomas O. Larsen, Mads H. Clausen, Mads H. Rønnest, Harald Löffler, Anthony D. Ho and Alwin Krämer, Cancer Res. 2007, 67, 6342-6350.
• A monoclonal antibody to feruloylated-(1,4)-β-D-galactan
  Mads H. Clausen, Marie-Christine Ralet, William G. T. Willats, Lesley McCartney, Sue E. Marcus, Jean-François Thibault and J. Paul Knox, Planta 2004, 219, 1036-1041.
• Synthesis of oligogalacturonates conjugated to BSA
  Mads. H. Clausen and Robert Madsen, Carb. Res. 2004, 339, 2159-2169.
• Synthesis of Hexasaccharide Fragments of Pectin
  Mads H. Clausen and Robert Madsen, Chem. Eur. J. 2003, 9, 3821-3832.
• Synthetic methyl hexagalacturonate hapten inhibitors of anti-homogalacturonan monoclonal antibodies LM7, JIM5 and JIM7
  Mads H. Clausen, William G. T. Willats and J. Paul Knox, Carb. Res. 2003, 338, 1797-1800.
• A strategy for chemical synthesis of selectively methyl-esterified oligomers of galacturonic acid
  Mads H. Clausen, Malene R. Jørgensen, Jesper Thorsen and Robert Madsen, J. Chem. Soc., Perkin Trans. 1 2001, 543-551.

Book chapter

Patents

Other publications

• "Udvikling af bedre medicin til kræftbehandling"
  Palle J. Pedersen, Mikkel S. Christensen, Fredrik Melander, Thomas L. Andresen, Robert Madsen, Mads H. Clausen, Dansk Kemi, 2011, 92, 6/7, 22-25.
  
• "Svampenaturstoffer som grundskelet for nye typer af lægemidler mod kræft"
  Mads H. Rønnest, Kasper Worm-Leonhard, Mads H. Clausen, Thomas O. Larsen, Dansk Kemi, 2009, 90, 6/7, 6-8.
  
• "Synthesis and Application of Pectic Oligosaccharides" pdf (8.1 Mb)
  Mads H. Clausen, Ph.D. Thesis, Technical University of Denmark, 2002.